{
  "_id": "6a1beadf1d7bb097a0a1ee57",
  "Package": "phase12designs",
  "Type": "Package",
  "Title": "Comprehensive Tools for Running Model-Assisted Phase I/II Trial\nSimulations",
  "Version": "0.3.1",
  "Authors@R": "c(person(given = \"Angela\", family = \"Cao\", role = c(\"aut\", \"cre\"), email = \"cao.t.angela@gmail.com\"),\nperson(given = \"Haolun\", family = \"Shi\", role = \"ctb\"))",
  "Author": "Angela Cao [aut, cre], Haolun Shi [ctb]",
  "Maintainer": "Angela Cao <cao.t.angela@gmail.com>",
  "Description": "Provides a comprehensive set of tools to simulate,\nevaluate, and compare model-assisted designs for early-phase\n(Phase I/II) clinical trials, including: - BOIN12 (Bayesian\noptimal interval phase 1/11 trial design; Lin et al. (2020)\n<doi:10.1200/PO.20.00257>), - BOIN-ET (Takeda, K., Taguri, M.,\n& Morita, S. (2018) <doi:10.1002/pst.1864>), - EffTox (Thall,\nP. F., & Cook, J. D. (2004)\n<doi:10.1111/j.0006-341X.2004.00218.x>), - Ji3+3 (Joint i3+3\ndesign; Lin, X., & Ji, Y. (2020)\n<doi:10.1080/10543406.2020.1818250>), - PRINTE (probability\nintervals of toxicity and efficacy design; Lin, X., & Ji, Y.\n(2021) <doi:10.1177/0962280220977009>), - STEIN (simple\ntoxicity and efficacy interval design; Lin, R., & Yin, G.\n(2017) <doi:10.1002/sim.7428>), - TEPI (toxicity and efficacy\nprobability interval design; Li, D. H., Whitmore, J. B., Guo,\nW., & Ji, Y. (2017) <doi:10.1158/1078-0432.CCR-16-1125>), -\nuTPI (utility-based toxicity Probability interval design; Shi,\nH., Lin, R., & Lin, X. (2024) <doi:10.1002/sim.8922>). Includes\nflexible simulation parameters that allow researchers to\nefficiently compute operating characteristics under various\nfixed and random trial scenarios and export the results.",
  "License": "MIT + file LICENSE",
  "Encoding": "UTF-8",
  "VignetteBuilder": "knitr",
  "RoxygenNote": "7.3.2.9000",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-31 07:20:04 UTC",
    "User": "root"
  },
  "Config/pak/sysreqs": "make libicu-dev",
  "Repository": "https://angela-cao.r-universe.dev",
  "Date/Publication": "2025-09-02 06:30:02 UTC",
  "RemoteUrl": "https://github.com/cran/phase12designs",
  "RemoteRef": "HEAD",
  "RemoteSha": "5a5f52455362b9a5ab63c728922aea43660d39f8",
  "MD5sum": "5bf955d96bccd8442d7918c08b4206da",
  "_user": "angela-cao",
  "_type": "src",
  "_file": "phase12designs_0.3.1.tar.gz",
  "_fileid": "535b5dba5e2fde467d550331883e3077c2d2c795d2968fdad00ba2c27ac5e8bf",
  "_filesize": 167984,
  "_sha256": "535b5dba5e2fde467d550331883e3077c2d2c795d2968fdad00ba2c27ac5e8bf",
  "_created": "2026-05-31T07:20:04.000Z",
  "_published": "2026-05-31T08:01:35.547Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 78708287480,
      "time": 246,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7314781437"
    },
    {
      "job": 78708287472,
      "time": 239,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7314780711"
    },
    {
      "job": 78708287488,
      "time": 235,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7315033919"
    },
    {
      "job": 78708287483,
      "time": 205,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7315031189"
    },
    {
      "job": 78708036077,
      "time": 275,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7314752501"
    },
    {
      "job": 78708287438,
      "time": 155,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7314770339"
    },
    {
      "job": 78708287451,
      "time": 201,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7314776430"
    },
    {
      "job": 78708287445,
      "time": 239,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7314781282"
    },
    {
      "job": 78708287453,
      "time": 211,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7314777511"
    }
  ],
  "_buildurl": "https://github.com/r-universe/angela-cao/actions/runs/26706268324",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/cran/phase12designs",
  "_commit": {
    "id": "5a5f52455362b9a5ab63c728922aea43660d39f8",
    "author": "Angela Cao <cao.t.angela@gmail.com>",
    "committer": "cran-robot <csardi.gabor+cran@gmail.com>",
    "message": "version 0.3.1\n",
    "time": 1756794602
  },
  "_maintainer": {
    "name": "Angela Cao",
    "email": "cao.t.angela@gmail.com",
    "login": "angela-cao",
    "description": "",
    "uuid": 126415015
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "trialr",
      "role": "Imports"
    },
    {
      "package": "Iso",
      "role": "Imports"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    }
  ],
  "_owner": "cran",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2025-36",
      "n": 1
    }
  ],
  "_tags": [
    {
      "name": "0.3.1",
      "date": "2025-09-02"
    }
  ],
  "_stars": 0,
  "_contributors": [
    {
      "user": "angela-cao",
      "count": 1,
      "uuid": 126415015
    }
  ],
  "_userbio": {
    "uuid": 126415015,
    "type": "user",
    "name": "Angela Cao"
  },
  "_downloads": {
    "count": 105,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/phase12designs"
  },
  "_searchresults": 0,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/phase12designs.html",
    "manual.pdf"
  ],
  "_realowner": "angela-cao",
  "_cranurl": false,
  "_releases": [
    {
      "version": "0.3.1",
      "date": "2025-09-02"
    }
  ],
  "_exports": [
    "decision_plot",
    "oc_boin12",
    "oc_boinet",
    "oc_efftox",
    "oc_ji3p3",
    "oc_pite",
    "oc_stein",
    "oc_tepi",
    "oc_utpi",
    "simulate_boin12",
    "simulate_boinet",
    "simulate_efftox",
    "simulate_ji3p3",
    "simulate_pite",
    "simulate_stein",
    "simulate_tepi",
    "simulate_utpi"
  ],
  "_help": [
    {
      "page": "decision_plot",
      "title": "Decision map plot",
      "topics": [
        "decision_plot"
      ]
    },
    {
      "page": "oc_boin12",
      "title": "Compute operating characteristics using BOIN12",
      "topics": [
        "oc_boin12"
      ]
    },
    {
      "page": "oc_boinet",
      "title": "Compute operating characteristics using BOINET",
      "topics": [
        "oc_boinet"
      ]
    },
    {
      "page": "oc_efftox",
      "title": "Compute operating characteristics using EffTox",
      "topics": [
        "oc_efftox"
      ]
    },
    {
      "page": "oc_ji3p3",
      "title": "Compute operating characteristics using Ji3+3",
      "topics": [
        "oc_ji3p3"
      ]
    },
    {
      "page": "oc_pite",
      "title": "Compute operating characteristics using PRINTE",
      "topics": [
        "oc_pite"
      ]
    },
    {
      "page": "oc_stein",
      "title": "Compute operating characteristics using STEIN",
      "topics": [
        "oc_stein"
      ]
    },
    {
      "page": "oc_tepi",
      "title": "Compute operating characteristics using TEPI",
      "topics": [
        "oc_tepi"
      ]
    },
    {
      "page": "oc_utpi",
      "title": "Compute operating characteristics using uTPI",
      "topics": [
        "oc_utpi"
      ]
    },
    {
      "page": "simulate_boin12",
      "title": "Simulate operating characteristics using BOIN12.",
      "topics": [
        "simulate_boin12"
      ]
    },
    {
      "page": "simulate_boinet",
      "title": "Simulate operating characteristics using BOINET",
      "topics": [
        "simulate_boinet"
      ]
    },
    {
      "page": "simulate_efftox",
      "title": "Simulate operating characteristics using EffTox",
      "topics": [
        "simulate_efftox"
      ]
    },
    {
      "page": "simulate_ji3p3",
      "title": "Simulate operating characteristics using Ji3+3",
      "topics": [
        "simulate_ji3p3"
      ]
    },
    {
      "page": "simulate_pite",
      "title": "Simulate operating characteristics using PRINTE",
      "topics": [
        "simulate_pite"
      ]
    },
    {
      "page": "simulate_stein",
      "title": "Simulate operating characteristics using STEIN",
      "topics": [
        "simulate_stein"
      ]
    },
    {
      "page": "simulate_tepi",
      "title": "Simulate operating characteristics using TEPI",
      "topics": [
        "simulate_tepi"
      ]
    },
    {
      "page": "simulate_utpi",
      "title": "Simulate operating characteristics using uTPI",
      "topics": [
        "simulate_utpi"
      ]
    }
  ],
  "_rundeps": [
    "abind",
    "arrayhelpers",
    "backports",
    "BH",
    "binom",
    "callr",
    "checkmate",
    "cli",
    "coda",
    "cpp11",
    "desc",
    "distributional",
    "dplyr",
    "farver",
    "generics",
    "ggdist",
    "ggplot2",
    "glue",
    "gridExtra",
    "gtable",
    "gtools",
    "inline",
    "Iso",
    "isoband",
    "labeling",
    "lattice",
    "lifecycle",
    "loo",
    "magrittr",
    "MASS",
    "matrixStats",
    "numDeriv",
    "pillar",
    "pkgbuild",
    "pkgconfig",
    "posterior",
    "processx",
    "ps",
    "purrr",
    "quadprog",
    "QuickJSR",
    "R6",
    "RColorBrewer",
    "Rcpp",
    "RcppEigen",
    "RcppParallel",
    "rlang",
    "rstan",
    "rstantools",
    "S7",
    "scales",
    "StanHeaders",
    "stringi",
    "stringr",
    "svUnit",
    "tensorA",
    "tibble",
    "tidybayes",
    "tidyr",
    "tidyselect",
    "trialr",
    "utf8",
    "vctrs",
    "viridisLite",
    "withr"
  ],
  "_vignettes": [
    {
      "source": "getting-started.Rmd",
      "filename": "getting-started.html",
      "title": "Getting Started",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Introduction",
        "Installation",
        "Simulating a Single Trial Scenario",
        "Fixed Scenarios",
        "Customizing Utility Parameters",
        "Simulating Multiple Scenarios",
        "Example Usage"
      ],
      "created": "2025-09-02 06:30:02",
      "modified": "2025-09-02 06:30:02",
      "commits": 1
    }
  ],
  "_score": 2,
  "_indexed": true,
  "_nocasepkg": "phase12designs",
  "_universes": [
    "angela-cao"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.3.1",
      "date": "2026-05-31T07:23:06.000Z",
      "distro": "noble",
      "commit": "5a5f52455362b9a5ab63c728922aea43660d39f8",
      "fileid": "0981b8846cf8b4d0f9a59cba6b8e2b021493c67a23ff79fb9fdde7257b3bd8db",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/angela-cao/actions/runs/26706268324"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.3.1",
      "date": "2026-05-31T07:22:53.000Z",
      "distro": "noble",
      "commit": "5a5f52455362b9a5ab63c728922aea43660d39f8",
      "fileid": "54836eb5b2199bdff684c07a7fdfa5a0e8f088ff0cc4e180d3a2fc31cb69fa5d",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/angela-cao/actions/runs/26706268324"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.3.1",
      "date": "2026-05-31T07:59:28.000Z",
      "commit": "5a5f52455362b9a5ab63c728922aea43660d39f8",
      "fileid": "5b6cc643bfaf88f01ed2ccf387873fd82eb2004bb106f56ad151578187188e45",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/angela-cao/actions/runs/26706268324"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.3.1",
      "date": "2026-05-31T07:59:04.000Z",
      "commit": "5a5f52455362b9a5ab63c728922aea43660d39f8",
      "fileid": "b401663a6dcfcefbee013bfdd50d5195d7d35dd4f1469a7b7d84ab668b1fd847",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/angela-cao/actions/runs/26706268324"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.3.1",
      "date": "2026-05-31T07:23:03.000Z",
      "commit": "5a5f52455362b9a5ab63c728922aea43660d39f8",
      "fileid": "bb528251b3a89f955920567564a74fe8fe4595b51bab7d61e43dfc97878dcd50",
      "status": "success",
      "buildurl": "https://github.com/r-universe/angela-cao/actions/runs/26706268324"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.3.1",
      "date": "2026-05-31T07:22:01.000Z",
      "commit": "5a5f52455362b9a5ab63c728922aea43660d39f8",
      "fileid": "75ecb4e11254e7606fb638eea68a1560de7657194f30c2c9334e111a9c174ccc",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/angela-cao/actions/runs/26706268324"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.3.1",
      "date": "2026-05-31T07:22:31.000Z",
      "commit": "5a5f52455362b9a5ab63c728922aea43660d39f8",
      "fileid": "789e5308badf274182b673bb9108cdf04f74b6c2b46af96c02e51fc1460f7047",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/angela-cao/actions/runs/26706268324"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "0.3.1",
      "date": "2026-05-31T07:22:03.000Z",
      "commit": "5a5f52455362b9a5ab63c728922aea43660d39f8",
      "fileid": "3c250fce80b0bb4d644834212e2460f11ff067b2ac25bfd2395d1ce14e12df86",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/angela-cao/actions/runs/26706268324"
    }
  ]
}